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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_4BL_FE8B8ABC4.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
MYB |
| Protein Properties |
Length: 191aa MW: 21363.3 Da PI: 8.0856 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_4BL_FE8B8ABC4.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl
Traes_4BL_FE8B8ABC4.1 28 RGPWTVDEDLTLINYIADHGEGRWNALARAAGLRRTGKSCRLRWLNYL 75
89********************************************97 PP
|
| 2 | Myb_DNA-binding | 30.5 | 8.4e-10 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg++T++E++l++d++ ++G++ ++ gRt++++k++w++
Traes_4BL_FE8B8ABC4.1 81 RGNFTADEQLLILDLHSRWGNR-XXXXXXXLP-GRTDNEIKNYWRT 124
89********************.88889****.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MASVTEDPAV RSSNSMAAEP EEEAELRRGP WTVDEDLTLI NYIADHGEGR WNALARAAGL 60
RRTGKSCRLR WLNYLRPDVK RGNFTADEQL LILDLHSRWG NRXXXXXXXL PGRTDNEIKN 120
YWRTRVQKHA KQLNCDVGSA TFKDAMRYLW MPHLVERIHA AAATAGGDPT MGDTSCASGV 180
TSMAATATTY P
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in the jasmonate-dependent defense responses to the rice blast fungus Magnaporthe oryzae. Does not seem to function in the salicylic acid-dependent signaling pathway. {ECO:0000269|PubMed:11310740}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA), wounding and infection by the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:11310740}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT009018 | 1e-135 | BT009018.1 Triticum aestivum clone wdk3c.pk006.n12:fis, full insert mRNA sequence. |
| Publications
? help Back to Top |
- Ahn IP,Kim S,Kang S,Suh SC,Lee YH
Rice Defense Mechanisms Against Cochliobolus miyabeanus and Magnaporthe grisea Are Distinct.
Phytopathology, 2005. 95(11): p. 1248-55
[PMID:18943354] - Campos-Soriano L,García-Martínez J,San Segundo B
The arbuscular mycorrhizal symbiosis promotes the systemic induction of regulatory defence-related genes in rice leaves and confers resistance to pathogen infection.
Mol. Plant Pathol., 2012. 13(6): p. 579-92
[PMID:22212404] - Yokotani N, et al.
Role of the rice transcription factor JAmyb in abiotic stress response.
J. Plant Res., 2013. 126(1): p. 131-9
[PMID:22847900] - Brenchley R, et al.
Analysis of the bread wheat genome using whole-genome shotgun sequencing.
Nature, 2012. 491(7426): p. 705-10
[PMID:23192148] - Wang D, et al.
Expression analysis of innate immunity related genes in the true/field blast resistance gene-mediated defence response.
Biotechnol. Biotechnol. Equip., 2014. 28(6): p. 999-1007
[PMID:26740780] - Fred AK,Kiswara G,Yi G,Kim KM
Screening Rice Cultivars for Resistance to Bacterial Leaf Blight.
J. Microbiol. Biotechnol., 2016. 26(5): p. 938-45
[PMID:26869604]
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