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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_4BL_97EDABD02.2 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
LBD |
Protein Properties |
Length: 223aa MW: 24005.3 Da PI: 6.0985 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_4BL_97EDABD02.2 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 127.1 | 8.2e-40 | 52 | 151 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88
+CaaCk+lrr+Ca++C+lapyfp ++p+kf +h++FGasn++kll+ lpe+ r da+ss+vyeAear+rdPvyG++g + +lq++ +
Traes_4BL_97EDABD02.2 52 PCAACKLLRRRCADGCMLAPYFPPTEPAKFTTAHRVFGASNIIKLLQVLPESSRADAVSSMVYEAEARLRDPVYGCAGAVCRLQKEAN 139
7*************************************************************************************** PP
DUF260 89 qlkaelallkee 100
+lk++la++++
Traes_4BL_97EDABD02.2 140 ELKVDLARAQAD 151
*******99875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MDYSNEATIT AATQPYVRSM SPPSRVSSCS PPPVFPLMGN APSSPPTIVL SPCAACKLLR 60 RRCADGCMLA PYFPPTEPAK FTTAHRVFGA SNIIKLLQVL PESSRADAVS SMVYEAEARL 120 RDPVYGCAGA VCRLQKEANE LKVDLARAQA DLLSIQTQHA NLLALVCVEF AANHRGDQQL 180 HQPPPLGDQL NGIGGSGGGA MYQPLYDSDF DSAAWEEARQ LWT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU953937 | 1e-137 | EU953937.1 Zea mays clone 1449845 LOB domain protein 11 mRNA, complete cds. |