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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_3DL_8AAFB7B06.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
HD-ZIP |
Protein Properties |
Length: 446aa MW: 49134.6 Da PI: 8.1609 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_3DL_8AAFB7B06.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 52.7 | 7.2e-17 | 44 | 98 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
r+ +++t++q+++Le +F + +p++++r +++++gLt +qVk+WFqN+R+ +k
Traes_3DL_8AAFB7B06.1 44 RRLQRLTPQQTQVLEGFFGICAHPDENQRMGMSESTGLTMQQVKFWFQNKRTHMK 98
666899**********************************************998 PP
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2 | START | 91.6 | 1.6e-29 | 197 | 412 | 1 | 203 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S. CS
START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla. 77
ela++a+ e+v + +a+ p+W+ ++ + +n++ + q+f + + +ea ra +v m++ + v ++d+ +++ ++
Traes_3DL_8AAFB7B06.1 197 ELAQSAMHEFVVLSEAGGPLWMPVPggsfDVLNNMAYAQTFGARSSanvilgFMTEATRADDMVMMDAKRIVDYIMDSE-CYTSFCPg 283
57899************************************66555899**99****************9999888888.*****999 PP
......EEEEEEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEE CS
START 78 ......kaetlevissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgilie 155
++++ +s+ ga +l + e+++ splvp R+ +fvR++r ++ g+ +ivdvS+d+ + v++++ pSg l++
Traes_3DL_8AAFB7B06.1 284 lvtsanTTKVYKWPTSAgynGAMHLVTVETVFASPLVPsRKCTFVRCCRDMQNGTVIIVDVSLDNGDGT------VKCHKMPSGVLVR 365
999555555555555658**********************************************99984......79*********** PP
EECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXX CS
START 156 pksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrq 203
++ s+vt++ehv +++ h+l+r+++ sgl++ga++wv+ rq
Traes_3DL_8AAFB7B06.1 366 SLNSDASQVTVIEHVQVNDTGLHELYRPTL-SGLMFGARRWVSSIVRQ 412
*****************************9.6999*******876665 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MTGNHGGRRR KAPQQGRPAR DDAVDISQSN SDGQDGAEGS QPKRRLQRLT PQQTQVLEGF 60 FGICAHPDEN QRMGMSESTG LTMQQVKFWF QNKRTHMKHV TGKEETYRMK AQNEMLREEN 120 KRLASAANTS FCPSCVALPG LNPSGEVQTL RQENEQLKQQ LSQLRAEAHP SSSRPFQLDP 180 STENITGREN DMDAIAELAQ SAMHEFVVLS EAGGPLWMPV PGGSFDVLNN MAYAQTFGAR 240 SSANVILGFM TEATRADDMV MMDAKRIVDY IMDSECYTSF CPGLVTSANT TKVYKWPTSA 300 GYNGAMHLVT VETVFASPLV PSRKCTFVRC CRDMQNGTVI IVDVSLDNGD GTVKCHKMPS 360 GVLVRSLNSD ASQVTVIEHV QVNDTGLHEL YRPTLSGLMF GARRWVSSIV RQSARLRDLF 420 IVSKSASNGN TNGRKTLMKI ADGLLA
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF332036 | 0.0 | JF332036.1 Triticum turgidum subsp. durum HD-Zip IV transcription factor GL9H2 mRNA, complete cds. |