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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_3AL_00FAACD5D.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
C2H2 |
| Protein Properties |
Length: 518aa MW: 56644.8 Da PI: 6.154 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_3AL_00FAACD5D.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 20.4 | 1.3e-06 | 278 | 299 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
C +Cgk F+r nL+ H+r H
Traes_3AL_00FAACD5D.1 278 FCVICGKGFKRDANLRMHMRGH 299
6*******************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010044 | Biological Process | response to aluminum ion |
| GO:0010447 | Biological Process | response to acidic pH |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003676 | Molecular Function | nucleic acid binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 518 aa
Download sequence Send
to blast |
MRKSSEISMK ASSSMASDAS GNTDPGQQGA RFSSMDQSCF ARPGQSIPGY PPFFGPQSSN 60
FYLPDDSVAK ACDPFEPNPP QNNPVADWDP QAMLSNLTFL EQKIKQVKDI VQSMGNRGSQ 120
DVGGSCELAA KQQLVTADLT SIIIQLISTA GSMLPSMKTP LLSSNPAVRQ LNTPGSPMGF 180
GSIVNQRPST VREEMVPDIT KTPDYEDLMN TLNPAHDEKD DLIKCPNPCV GEGPEPVPME 240
DHDVKESDDG GEAEHLPPGS YVVLQLEKEE ILAPHTHFCV ICGKGFKRDA NLRMHMRGHG 300
DEYKTPAALA KPMRDSVSDP TPVTRYSCPY VGCKRNKEHR KFQPLKTILC VKNHYKRSHC 360
DKRYTCSRCN TKKFSVIADL KTHEKHCGRD KWLCSCGTTF SRKDKLFGHV ALFQGHTPAL 420
PMDDIKATGA SEQRSEAMDD MVGSTGYNFP GSTSDGIPNL DMKVADDTRG YFSPLNFDPC 480
FGALDDFARP GFDISENPFS FLPSGPGSCS FGQLSGDS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF034793 | 0.0 | KF034793.1 Triticum aestivum isolate A cultivar Barbela 7/72/92 STOP1 gene, complete cds. |
| GenBank | KF034796 | 0.0 | KF034796.1 Triticum aestivum isolate A cultivar Anahuac STOP1 gene, complete cds. |
