PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_CF47A74CC.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 290aa    MW: 30666.3 Da    PI: 5.7542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_CF47A74CC.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-19140190255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp +ng  +r++lg+++tae+Aa a+++a+ +++g
  Traes_2BL_CF47A74CC.2 140 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDTAEDAAVAYDRAAYRMRG 190
                            8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.28E-29139198No hitNo description
Gene3DG3DSA:3.30.730.105.5E-32139198IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-23140200IPR016177DNA-binding domain
PfamPF008473.1E-13140190IPR001471AP2/ERF domain
SMARTSM003803.9E-38140204IPR001471AP2/ERF domain
PROSITE profilePS5103224.21140198IPR001471AP2/ERF domain
PRINTSPR003671.3E-10141152IPR001471AP2/ERF domain
PRINTSPR003671.3E-10164180IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MLLNPASEAM VLDSIRQHLM EDTAAPAPEA RRQRPAYCRS ASFGSLVADQ WSESLPFRAD  60
DSDDMVVYGA LRDAFSCGWL PDGSFAAVKP EPLLPSPDSC YVGFLEPETP PATSPGGSEE  120
EAAAAFMGEE AAAAVARGKH YRGVRQRPWG KFAAEIRDPA KNGARVWLGT YDTAEDAAVA  180
YDRAAYRMRG SRALLNFPLR IGSEIAAAHA AAAAAGDKRP SPEPATSDSS SSSSSSGSPK  240
RRKRGEAAAA SMAMALVPPS SQLSRPAHAW YPAVPAEQVA MAPCVQQLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-39136203168ATERF1
3gcc_A3e-39136203168ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3745700.0AK374570.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3069F19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151124.11e-163ethylene-responsive transcription factor 2-like
SwissprotQ404798e-58ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A3B6CBG00.0A0A3B6CBG0_WHEAT; Uncharacterized protein
TrEMBLA0A446MLT60.0A0A446MLT6_TRITD; Uncharacterized protein
STRINGTraes_2BL_CF47A74CC.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-39ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]
  2. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]