PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2BL_245DDBC7B.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 449aa    MW: 47324 Da    PI: 9.6143
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2BL_245DDBC7B.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_174.61.3e-23330392163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+e+krerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN aL+ el++lkk ++ +++++
  Traes_2BL_245DDBC7B.2 330 EREIKRERRKQSNRESARRSRLRKQQECEELSRKVAELTTENNALRTELDQLKKACEDMEAQN 392
                            89********************************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165962.5E-8185303No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-17329391No hitNo description
PfamPF001704.5E-21330392IPR004827Basic-leucine zipper domain
SMARTSM003381.7E-21330394IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.426332395IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.6E-11333388No hitNo description
CDDcd147022.63E-20335385No hitNo description
PROSITE patternPS000360337352IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MCTGRCTRSK RTPNPSLFAL PLLAPPARLL LPHTAQVAPP PVARYTHHLR RFLPPRAGEV  60
QKHPRSLPRA RMASSSDEQP KPPEPPAAAV AVATAAPQSH AEWAASMQAF YASGGHPYAA  120
WPAQHLMAAA AASGTSYGAP VPFPMYHPGA AMAYYAHASM AAGVPYPTAE AVAAAAAAPV  180
VAEGKGKAKG GGLSSEKGSS AAPSGDDASQ SCDSGSDESS DTRDYDTDQK DSSAPKKRKS  240
GNTSAEGEPS QAAAVPYAAV ESPYQLKGRS ASKLPVSAPG RAALPNATPN LNIGIDLWSA  300
SQSLAVIPVQ GEANPGLALA RCDGVGQLDE REIKRERRKQ SNRESARRSR LRKQQECEEL  360
SRKVAELTTE NNALRTELDQ LKKACEDMEA QNARLMSQEP AAVTTTLGMS IAAPKVQQHD  420
DEGKLHKKAN NNSNGKYVGG SRKLEANPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1346352RRSRLRK
2346353RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1ALZ0.0D64051.1 Triticum aestivum mRNA for HALF-1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159000.10.0DNA-binding protein EMBP-1-like isoform X2
SwissprotP250323e-60EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A3B6C5B10.0A0A3B6C5B1_WHEAT; Uncharacterized protein
STRINGTraes_2BL_245DDBC7B.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-26basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]