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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_2BL_1E7B7A8CA.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
E2F/DP |
Protein Properties |
Length: 457aa MW: 49750 Da PI: 5.0025 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_2BL_1E7B7A8CA.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 79.7 | 2.6e-25 | 145 | 210 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r e+sL+ lt+kf++ll+++e+gi++ln+va+ L v k+RRiYDi+NVLe+++l+ekk kn+irw+g
Traes_2BL_1E7B7A8CA.1 145 RAEHSLGELTKKFISLLKQAEDGILDLNNVAEIL---VV--KKRRIYDITNVLEGIGLLEKKLKNRIRWRG 210
6799******************************...88..9***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 457 aa
Download sequence Send
to blast |
MSGGGRPQAA QQIVQSVQKC VPLAPERPPF AVPAEYHRFP LPPSSSAPAA ASRGSAGGDV 60 EEGIVIRTPL KRKAPCGESD AIESTEWMIT SPGFTEGVSS PHMTPISGKA ARTYKSKAKG 120 SKDGLQTPIS NAGSPGTPLT PGSSRAEHSL GELTKKFISL LKQAEDGILD LNNVAEILVV 180 KKRRIYDITN VLEGIGLLEK KLKNRIRWRG LDDSGANLDN EISVLETELE NLKLQEKALD 240 NRISEMHEKV RELTEEENNQ RWLYLTEDDI KGLPCFQNET LIAIKAPHGT TLEVPDPDEA 300 GDYIQRRYTI VIRSTMGSID LYLVSKFEEN MEELVGVATP PRHANVAEPA STDGFIATEA 360 GQSSRSKDKL PNIQHIHRTP DLNAQVGGMA KITPEFDVDA DYYLLTDGDA SSITDMWRTA 420 PEVQWDQFLA EEATAPRTPQ QHPAVVGKST AVGPTCG
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK372442 | 0.0 | AK372442.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3002B23. |