PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_2AS_B1B372658.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 85aa MW: 9722.17 Da PI: 10.8704 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.3 | 7.6e-09 | 41 | 61 | 5 | 25 |
CHHHCHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk 25 k rr+++NReAAr+sR+RKk Traes_2AS_B1B372658.2 41 KTLRRLAQNREAARKSRLRKK 61 788*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-5 | 38 | 62 | No hit | No description |
Pfam | PF07716 | 1.4E-5 | 39 | 62 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-5 | 41 | 67 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 44 | 59 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence Send to blast |
YSKHSQVVYC LQLEQGQSGG AIMASNSSDR SDRSDKPLDQ KTLRRLAQNR EAARKSRLRK 60 KVIAINLAPI FHCSLMFRIF SFYST |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK363931 | 7e-72 | AK363931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2020D02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189386.1 | 1e-24 | transcription factor TGA2.1 | ||||
Refseq | XP_020189387.1 | 1e-24 | transcription factor TGA2.1 | ||||
TrEMBL | A0A453AMD6 | 8e-33 | A0A453AMD6_AEGTS; Uncharacterized protein | ||||
STRING | Traes_2AS_B1B372658.2 | 1e-56 | (Triticum aestivum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 7e-10 | bZIP family protein |
Publications ? help Back to Top | |||
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