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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_2AL_E2F8D46CE.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB_related |
Protein Properties |
Length: 319aa MW: 34281 Da PI: 6.5238 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_2AL_E2F8D46CE.2 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 36.9 | 8.3e-12 | 118 | 154 | 10 | 48 |
HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
Traes_2AL_E2F8D46CE.2 118 QSIIQLHQLLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 154
6789*********.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
GINTRGTPAT PPLLRGIRQA SRAPSHLFSS LVFSSLPQGG QRHSASASGL LRAREFGRER 60 GGNGEGSVLR EDGPQEGPLD AGGGQDPGRP HPQPRPRQLA RAAQASRPAA VRQELPEQSI 120 IQLHQLLGNR WSAIAARLPG RTDNEIKNVW HTHLKKRLDP GAQEQLEEAS AAKKRKKPAA 180 AARKREGKIK MRKLDALTAK AAPVLSSPDR SVSSTLTEST STASAAEEQH GNSGSSASAS 240 ASVKEECFTS SEESEEFQID ESFWSETLSM PLDDINDVCM EPHDAFGKPA DGDMDYWLKV 300 FMEGGGDDNN DGALDLPQI
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 154 | 176 | KKRLDPGAQEQLEEASAAKKRKK |
2 | 172 | 176 | KKRKK |
3 | 175 | 192 | KKPAAAARKREGKIKMRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in cold stress response (PubMed:14675437, PubMed:20807373, PubMed:22246661). Regulates positively the expression of genes involved in reactive oxygen species (ROS) scavenging such as peroxidase and superoxide dismutase during cold stress. Transactivates a complex gene network that have major effects on stress tolerance and panicle development (PubMed:20807373). {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|PubMed:22246661}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold stress. {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|Ref.2}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY615199 | 0.0 | AY615199.1 Triticum aestivum transcription factor Myb2 (Myb2) mRNA, complete cds. |
GenBank | JF951943 | 0.0 | JF951943.1 Triticum aestivum clone TaMYB60 MYB-related protein mRNA, complete cds. |