PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AL_14B1B159F.2
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 315aa    MW: 32502.2 Da    PI: 8.09
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AL_14B1B159F.2genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.5e-11259289131
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeL 31 
                            e+e+krerrkq+NRe+ArrsR+RK+  +e L
  Traes_2AL_14B1B159F.2 259 EREIKRERRKQSNRESARRSRLRKQVVMELL 289
                            89***********************877755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.9E-7119232No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-8258290No hitNo description
PfamPF001706.0E-9259289IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-6263309No hitNo description
CDDcd147021.52E-10264310No hitNo description
PROSITE patternPS000360266281IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MASSSDEQPK PPEPPAAAVA VATAAPQSHA EWAASIQAFY ASGGHPYAAW PAQQLMAAAA  60
ASGTSYGAPV QFPMYHPGAA MAYYAHASMA AGVPYPTAEA VAAAAAAPVV AEGKGKAKGG  120
DVSPEKGSSA APSGDDASQS CGSGSDESSD TRDYDTDQKD SSAPKKRKSG NTSAEGEPSQ  180
AAAVPYAAVE SPYQLKGRSA SKLPVSAPGR AALPNATPNL NIGIDLWSAS QSLAVIPVQG  240
EANPGLALAR CDGVGQLDER EIKRERRKQS NRESARRSRL RKQVVMELLH LIAKIHLHSV  300
ITLRQQQSHM PAVAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1275281RRSRLRK
2275282RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1ALZ0.0D64051.1 Triticum aestivum mRNA for HALF-1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159000.11e-161DNA-binding protein EMBP-1-like isoform X2
SwissprotP250326e-38EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A446KYA70.0A0A446KYA7_TRITD; Uncharacterized protein
STRINGTraes_2AL_14B1B159F.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-15basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]