PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Traes_1BL_DE2CF9613.1

Organism

Triticum aestivum

Taxonomic ID

4565

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 479aa MW: 51670.7 Da PI: 9.5603

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Traes_1BL_DE2CF9613.1	genome	IWGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50	6.4e-16	409	452	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ Traes_1BL_DE2CF9613.1 409 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKKQ 452 79***************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.3E-15	403	452	No hit	No description
SMART	SM00338	1.3E-12	405	477	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	407	452	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.98E-26	409	463	No hit	No description
SuperFamily	SSF57959	5.25E-11	409	454	No hit	No description
Pfam	PF00170	2.6E-13	409	452	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	412	427	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence Send to blast
VAHGFASGPI RQFLPSPPLP LPPWLPPPSP PPPFPNGRRQ TEPALTAARG LDPAPGGRES 60 RGCPVQFDAD SSWEVGAAEI RSPDLPPIRW SPSFPEEKSR RFVRRRVLCA VSWICGSATC 120 DRVFAGGKGA ALGIVVPEVF VPIGATSSRE RRFMIQAMAS QSQAGGGGGG GYAGPGQRGQ 180 AQGLARQGSL YSLTLDEVQS QLTEPLLSMN LDELLKSVFP DGVDPVGGVA GQSEPAPGLH 240 RQGSITMPPE LSKKTVDEVW KGIQDSPKRS GEEGIRRRRE RQPTFGEMTL EDFLVKAGVV 300 AEGHLKDPID LPANMGAVGS SVTAAAPSLN PGAHWLQQYL EPQHPSMAGP FMASHLGPQP 360 LSVATGAIME PIYPDGQITS PMLDALSDPQ TPRRKRGASD GVTDKVVERR QKRMIKNRES 420 AARSRARKQA YTNELENKVS RLEEENERLK KQKELDMMIT SAPPPEPKYQ LRRTSSAPV

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence Send to blast

VAHGFASGPI RQFLPSPPLP LPPWLPPPSP PPPFPNGRRQ TEPALTAARG LDPAPGGRES  60
RGCPVQFDAD SSWEVGAAEI RSPDLPPIRW SPSFPEEKSR RFVRRRVLCA VSWICGSATC  120
DRVFAGGKGA ALGIVVPEVF VPIGATSSRE RRFMIQAMAS QSQAGGGGGG GYAGPGQRGQ  180
AQGLARQGSL YSLTLDEVQS QLTEPLLSMN LDELLKSVFP DGVDPVGGVA GQSEPAPGLH  240
RQGSITMPPE LSKKTVDEVW KGIQDSPKRS GEEGIRRRRE RQPTFGEMTL EDFLVKAGVV  300
AEGHLKDPID LPANMGAVGS SVTAAAPSLN PGAHWLQQYL EPQHPSMAGP FMASHLGPQP  360
LSVATGAIME PIYPDGQITS PMLDALSDPQ TPRRKRGASD GVTDKVVERR QKRMIKNRES  420
AARSRARKQA YTNELENKVS RLEEENERLK KQKELDMMIT SAPPPEPKYQ LRRTSSAPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	269	DSPKRS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU307112	0.0	EU307112.2 Triticum aestivum FD-like 2 protein mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020181441.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-78	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A3B5Z204	0.0	A0A3B5Z204_WHEAT; Uncharacterized protein
STRING	Traes_1BL_DE2CF9613.1	0.0	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-73	ABA-responsive element binding protein 3

Publications ? help Back to Top
Brenchley R, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature, 2012. 491(7426): p. 705-10 [PMID:23192148] Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]