 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Traes_1AS_B348717F1.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
Dof |
| Protein Properties |
Length: 361aa MW: 37197.5 Da PI: 8.483 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_1AS_B348717F1.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 118.9 | 1.9e-37 | 88 | 147 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
+e+ lkcprCds+ntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+
Traes_1AS_B348717F1.1 88 PEQGLKCPRCDSANTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 147
57899*************************************************998765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MIFPPSFLDS SSWNDNQHAH HQQVAAASCG GGAGDGGCNN HELLQPSIMQ QGTLAEGGDG 60
GGSGGQVVGP AKPMSMSERA RLARVPLPEQ GLKCPRCDSA NTKFCYFNNY SLSQPRHFCR 120
ACRRYWTRGG ALRNVPVGGG YRRHAKRAKP KQAAAAAAAG APAASGAASG GSTTSSTTSA 180
CTTMSNPAPV LPAMLQNGGG GNLSGLLPPL LRLADFDAMS LGSTFSGMGK PSPVDSPAGY 240
YLGGGGGGAV PGLEQWRVQQ MQGFPFFQAM ADQQHTLTPA AAPAMAMPGM FHYLGLGNGG 300
DGRGVHEDDG GDQQFHHAMP SKRECYPRSG SIAMYGGDHH LTAGAGYTSS YSNAATGNHL 360
L
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AM084353 | 0.0 | AM084353.1 Hordeum vulgare subsp. vulgare dof5 gene for dof zinc finger protein 5, exons 1-2. |
