PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1AL_F18EC96DF.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 349aa    MW: 36898.7 Da    PI: 9.9821
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1AL_F18EC96DF.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1703.7e-22210272163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l+k ++kl+ e+
  Traes_1AL_F18EC96DF.1 210 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLTKSSEKLRIEN 272
                            799*******************************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.2E-19159IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.5E-17205269No hitNo description
SMARTSM003381.2E-21210274IPR004827Basic-leucine zipper domain
PfamPF001707.5E-21210272IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162212275IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-11213268No hitNo description
CDDcd147021.14E-21215263No hitNo description
PROSITE patternPS000360217232IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MQAYYGSGVM PPAYFAPAIA AGHPPPPYMW GPQHMMPPPF GTPYAMYPHG GAYPHPLVPM  60
MASPLSVEPA KSANSKDKSS NKKLKEIDGS AVSTGSGNSK KTSSSGDYSG EGSSDVNDLK  120
VSGTPRKRSL DGGFDAEATA AARNKDVVAS SPIIRNGAIL SNQCFPAPVI KPSVTNVANS  180
RAIGTPVSPL PGVMGPIHTG ISTELSSKDE REVKREKRKQ SNRESARRSR LRKQAETEEL  240
ATQVESLTAE NTSLKSEIGK LTKSSEKLRI ENSALVMKLK GTAAPTSAEM PLDKSAVAAP  300
SSSPRVVENF LSMIDDTSKS GVKNHMEHSE PKLRQLLGSS ATTDVVAAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226232RRSRLRK
2226233RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2254640.0KT225464.1 Triticum aestivum GBF1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151704.10.0common plant regulatory factor 1-like
RefseqXP_020151705.10.0common plant regulatory factor 1-like
TrEMBLA0A0P0GP390.0A0A0P0GP39_WHEAT; GBF1
TrEMBLA0A446JB010.0A0A446JB01_TRITD; Uncharacterized protein
STRINGTraes_1AL_F18EC96DF.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.15e-29G-box binding factor 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]