 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_1AL_F16BCEC90.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
CPP |
| Protein Properties |
Length: 247aa MW: 28204.8 Da PI: 7.4824 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_1AL_F16BCEC90.2 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 44.5 | 3.1e-14 | 36 | 73 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaa.gkkCseeCkCedCkNk 39
++gCnCkks+ClkkYC+C+++ g+ Cs C+CedCkN
Traes_1AL_F16BCEC90.2 36 RRGCNCKKSSCLKKYCDCYQQdGTGCSLFCRCEDCKNP 73
589****************853899************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MLHFLSSLWL ITIISILCLC HLQEDAHNSS SSTPPRRGCN CKKSSCLKKY CDCYQQDGTG 60
CSLFCRCEDC KNPYGKNEGF MADESKRFIY TGADLDHSED EHDFVVERSP RLQSPISKES 120
SFQHTPPRSK ASSRDTHLLP QVLSQWQPRS WQLSLKRQGN DHRAVDDSGE NHKSSSHEWQ 180
LAKHQVQEDA YSISRCVQIL NGMVELSQVE KSVAPDVFLQ PGNREIFVSL GLDVRALWLK 240
RKIQHLT
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK367866 | 0.0 | AK367866.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2063M24. |
| GenBank | AK374557 | 0.0 | AK374557.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3069A23. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G22760.1 | 5e-18 | Tesmin/TSO1-like CXC domain-containing protein |
