PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1AL_D36224AD9.1
Organism
Triticum aestivum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TALE
Protein Properties Length: 764aa    MW: 82322.1 Da    PI: 10.0074
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1AL_D36224AD9.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.72.6e-105375741954
                            HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
               Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                            Fe   ++yp+ ++++ LAk++gLt +qV++WF N R +
  Traes_1AL_D36224AD9.1 537 FEHflHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVR 574
                            554459******************************88 PP
2BELL84.99.7e-28404472372
                   BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                            +e q +k++L +l+eeV+krY+qy++qlq+vissFe+vagl +a+p++s+Al+++S+hF+ Lk  i +q+
  Traes_1AL_D36224AD9.1 404 AEQQWRKTRL-TLMEEVCKRYRQYYQQLQAVISSFETVAGLSNAAPFASIALRTMSKHFKYLKSTIQSQL 472
                            5789999997.788*****************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.9E-30332470IPR006563POX domain
PfamPF075263.0E-34337468IPR006563POX domain
PROSITE profilePS5007112.455515578IPR001356Homeobox domain
CDDcd000868.98E-14518579No hitNo description
SMARTSM003891.4E-11518582IPR001356Homeobox domain
SuperFamilySSF466894.28E-17520585IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-28521582IPR009057Homeodomain-like
PfamPF059207.2E-19535574IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    Send to blast
TTPGRQPGSP LALARVIHLV HPPPLPHSLT RTSRPDQHQL PFCLSLSLLT ISRRPPPSFA  60
SSSAAASLAA ARTFAEREKG KAPHPNPARR HHQKRTKAEG HQIRSADRAR GDEPLPVLPP  120
GQALAKCGSR CLLDLPSPFL SSTPPSLSLS LTLSRASSQV TELRRAASEA GRAELTYVRA  180
HVHGRAAAIA MSSAAGGYGG GAEHQHQHQQ HHQHQLLLGQ AAAGQLYHVP QHSRREKLRF  240
PPDPADSSSP TPGAWPPPTV PFYSYASSSS SYSPHSPTLA HAHNQLLVHG MPAGAQIPSQ  300
NFALSLSSSS SNPPPQQRRH LAGATGPYGP FTGYAAVLGR SRFLGPAQKL LEEICDVGGR  360
PSQLDRCSDD GLLDLDAMDA AGDVGHEMDS SDRAAAEGVT VSGAEQQWRK TRLTLMEEVC  420
KRYRQYYQQL QAVISSFETV AGLSNAAPFA SIALRTMSKH FKYLKSTIQS QLRNTSKVAA  480
GKDSLGKEDM ANFGIMGGGA ALMRGSNANT FSQPHNIWRP QRGLPERAVS VLRAWLFEHF  540
LHPYPTDSDK QMLAKQTGLT RNQVSNWFIN ARVRLWKPMV EEIHNLEMRQ GHKSSAADKN  600
QLGAQQQTQQ HSPDSSGRPS DPSNSQQGQS SSMSQGRGAH HHNASRHIQS ELSPMTHDMA  660
GQVSFAYNGG GMAAHHHGSM ALSHPQHVEG GAGSSGGVSL TLGLHQNNRA YIAEPLPAAL  720
PLNLAHRFGL EDVSDAYAMA ASFGGQDRHF TKEMGGHLLH DFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-16524582563Homeobox protein Meis2
3k2a_B1e-16524582563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB5466460.0AB546646.1 Triticum aestivum WBLH3 mRNA for BEL1-type homeodomain protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165654.10.0BEL1-like homeodomain protein 9
TrEMBLA0A3B5Y2S90.0A0A3B5Y2S9_WHEAT; Uncharacterized protein
STRINGTraes_1AL_D36224AD9.10.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.13e-73TALE family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]