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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_1AL_C76BCC7EC.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
NAC |
Protein Properties |
Length: 255aa MW: 28316.6 Da PI: 8.3496 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_1AL_C76BCC7EC.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 133.6 | 1.3e-41 | 4 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyW 83
lppG+rF Pt+eelv +yL++ ++g++ ++e+vi+ +d+++++Pw+Lp+ +++++ + w++F+ r+ ++a+g r++r+t sgyW
Traes_1AL_C76BCC7EC.1 4 LPPGYRFYPTEEELVRFYLRHMLDGRRrGDIERVIPVADVCSLDPWQLPEvhrgACAGHGEPWFYFCARQDREARGGRPSRTTPSGYW 91
79***********************996677789**************95456544557889************************** PP
NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
ka g+ v+s++g vg+kkt+vfy+grap g kt+W m+eyr+
Traes_1AL_C76BCC7EC.1 92 KAAGTPGLVYSAGGCPVGTKKTMVFYRGRAPAGAKTKWKMNEYRA 136
*******************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MGELPPGYRF YPTEEELVRF YLRHMLDGRR RGDIERVIPV ADVCSLDPWQ LPEVHRGACA 60 GHGEPWFYFC ARQDREARGG RPSRTTPSGY WKAAGTPGLV YSAGGCPVGT KKTMVFYRGR 120 APAGAKTKWK MNEYRAFDDD GADADAAARL QVRSEFSLCR LYTRSGSLRQ FDRRPCTVAA 180 GGRRSEDPAS PSAAPASASE DVEVGKGQKR KRHAANDVPS SSDAYRSVQQ QQKQGGADEE 240 LVDGMTDWAE LFDWI
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-29 | 4 | 167 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-29 | 4 | 167 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-29 | 4 | 167 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-29 | 4 | 167 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swm_B | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swm_C | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swm_D | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swp_A | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swp_B | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swp_C | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
3swp_D | 5e-29 | 4 | 167 | 20 | 171 | NAC domain-containing protein 19 |
4dul_A | 5e-29 | 4 | 167 | 17 | 168 | NAC domain-containing protein 19 |
4dul_B | 5e-29 | 4 | 167 | 17 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK359954 | 0.0 | AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05. |