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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_1AL_79B8C6F15.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
TCP |
Protein Properties |
Length: 306aa MW: 32939.8 Da PI: 7.2716 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_1AL_79B8C6F15.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 100.1 | 3.9e-31 | 50 | 165 | 3 | 115 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.. 88
g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a+++i++l+ ++++++ + sa++++++
Traes_1AL_79B8C6F15.1 50 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDD----LLLSAHHHHHHlq 133
78******************************************************************333....3333333333333 PP
TCP 89 .....kaaksaakskksqksaasalnlakesr 115
+++ ++ +++++ aas+ ++ ++
Traes_1AL_79B8C6F15.1 134 ptssmTSMAMVPPFSHATAAAASMMVVDSDKA 165
33211333333333333333333333333333 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MISAGDHGND RRKFEPAAAG NKALQAAAAA SRHWSASTES RIVRVSRVFG GKDRHSKVRT 60 VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLN AAQHEIDKLP PLQFPPHDDD 120 LLLSAHHHHH HLQPTSSMTS MAMVPPFSHA TAAAASMMVV DSDKAAQAHD GGGDLKGFMS 180 LSNSLGLVNG AGASMPTLAA AQAGSYHHHY AAHEAWSNGG NNVQEQLGGH RSSPHVVPHH 240 GLPFPSLLSL APVSQFVFYT PEGGFAMKDV ASDDQFPVDN LDDSQGQLSL SSRGEAFFTQ 300 EARVDR
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK359359 | 0.0 | AK359359.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1095A23. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G60970.1 | 6e-41 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |