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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_1AL_309623B48.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 290aa MW: 32330.8 Da PI: 5.933 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61 | 2.2e-19 | 136 | 197 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 +D ++WrKYG K++ ++fpr YYrC ++ +Cp+kk v+++ ++dp ++ +t ++H+++ Traes_1AL_309623B48.1 136 NDRFHWRKYGEKKILHADFPRLYYRCGYSdehKCPAKKYVQQQnSSDPPMFLVTLINDHTCD 197 79*************************998899*******875167*************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.7E-20 | 127 | 197 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-19 | 130 | 197 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.262 | 130 | 199 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.9E-28 | 135 | 198 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-20 | 136 | 197 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MAMRPKSEMS PPPAPPSPSD QRDAVIEELR KGSQLAEFLR QQVELIPEDS RRDAALANVT 60 DITTALASSL SVLQSEREQY YCSSSSDAGH ASGASGGGGV RNGAVARTRN RKAKHRRGTY 120 GEELPIKEIL TEAPENDRFH WRKYGEKKIL HADFPRLYYR CGYSDEHKCP AKKYVQQQNS 180 SDPPMFLVTL INDHTCDTLF PDEDQDQPPS SSSSANNSQV LDFSKASLSS AVGISRLKKE 240 EDADMSVTVP SYNYTYDELS SSSLPFLSPK QWEMEMEVKS LFRRHSGDGN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 116 | NRKAKHRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177339.1 | 1e-168 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A3B5Y451 | 0.0 | A0A3B5Y451_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446J636 | 0.0 | A0A446J636_TRITD; Uncharacterized protein | ||||
STRING | Traes_1AL_309623B48.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9993 | 29 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 1e-16 | WRKY DNA-binding protein 55 |
Publications ? help Back to Top | |||
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