 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Traes_1AL_179FC28F2.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
| Family |
NAC |
| Protein Properties |
Length: 257aa MW: 28432.6 Da PI: 8.4574 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Traes_1AL_179FC28F2.1 | genome | IWGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 138.8 | 3.3e-43 | 4 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyW 83
lppG+rF Pt+eelv +yL++k++g++ ++e+vi+ +d+++++Pw+Lp+ +++++ + w++F+ r+ ++a+g r++r+t sgyW
Traes_1AL_179FC28F2.1 4 LPPGYRFYPTEEELVRFYLRHKLDGSRrADIERVIPVADVCSLDPWQLPEvhrgACASHGEPWFYFCARQDREARGGRPSRTTPSGYW 91
79**********************9997888889**************95466655567889************************** PP
NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
ka g+ v+s++g+lvg+kkt+vfy+grap g kt+W m+eyr+
Traes_1AL_179FC28F2.1 92 KAAGTPGLVYSAGGHLVGTKKTMVFYRGRAPAGAKTKWKMNEYRA 136
*******************************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MAALPPGYRF YPTEEELVRF YLRHKLDGSR RADIERVIPV ADVCSLDPWQ LPEVHRGACA 60
SHGEPWFYFC ARQDREARGG RPSRTTPSGY WKAAGTPGLV YSAGGHLVGT KKTMVFYRGR 120
APAGAKTKWK MNEYRALEED GADADAAAPA SNPVFQVRSE FSLCRLYTSS GNMRQFDRRP 180
CTAVAGGSRA SSSAALASPN EDVEVGRGQK RKRHAANDNT SSSDAYRHVQ QQQGKQEGAN 240
EELADDMTDW AEVLAWI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-30 | 3 | 167 | 16 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-30 | 3 | 167 | 16 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-30 | 3 | 167 | 16 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-30 | 3 | 167 | 16 | 163 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swm_B | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swm_C | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swm_D | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swp_A | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swp_B | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swp_C | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 3swp_D | 8e-30 | 3 | 167 | 19 | 166 | NAC domain-containing protein 19 |
| 4dul_A | 8e-30 | 3 | 167 | 16 | 163 | NAC domain-containing protein 19 |
| 4dul_B | 8e-30 | 3 | 167 | 16 | 163 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK359954 | 0.0 | AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05. |
