 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp7g35220 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
LBD |
| Protein Properties |
Length: 252aa MW: 27516.3 Da PI: 8.2169 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp7g35220 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 93.8 | 2e-29 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+C++C+vlr++C++ C+l+p++ +++q +++ +v+k+FG++ ++++++a+pe +r+++++sl++eA+ r+ +Pv+Gavg++ +++++++q+++e++
Tp7g35220 2 SCNGCRVLRKGCSETCILRPCLqwiesAESQGHATVFVAKFFGRAGLMSFISAVPEPNRPALFQSLLFEACGRTVNPVNGAVGMLGTGNWHVCQAAVETV 101
6*********************9999777889****************************************************************9988 PP
DUF260 96 ll 97
l+
Tp7g35220 102 LR 103
76 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSETCILR PCLQWIESAE SQGHATVFVA KFFGRAGLMS FISAVPEPNR 60
PALFQSLLFE ACGRTVNPVN GAVGMLGTGN WHVCQAAVET VLRGGTLRPI SDLLESPSLI 120
FSDESSEICT EIWRMQRSRN NEDSRNHHCR FSTSRSKLST TGMEESPVTR KRFKSDRSDS 180
VLGLQLNHGL ALTGSVVPVP LLPPPPFCKV VNGDRPGSPS EESVTTSCWE NGISGGDGYG 240
NKRERKLLNL FV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB473874 | 1e-159 | AB473874.1 Arabidopsis thaliana ASL41 mRNA for ASYMMETRIC LEAVES2-like 41 protein, complete cds. |
| GenBank | AY072144 | 1e-159 | AY072144.1 Arabidopsis thaliana unknown protein (At4g37540) mRNA, complete cds. |
| GenBank | AY122976 | 1e-159 | AY122976.1 Arabidopsis thaliana unknown protein (At4g37540) mRNA, complete cds. |
