 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp7g20710 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
LBD |
| Protein Properties |
Length: 215aa MW: 23460.8 Da PI: 4.9356 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp7g20710 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 104.2 | 1.1e-32 | 5 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCa....kdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96
+CaaCkvl+ +C+ ++C++ap fp+++p+kf vh++FGa+nv k+l+++++ ere+a+ssl+yeAear++dP++G vg+ + l++ l++lk+++++
Tp7g20710 5 PCAACKVLNSSCTmvppQECIFAPFFPSTEPEKFDRVHRVFGAENVYKILANVKPWERETAVSSLCYEAEARIQDPISGYVGMQSILENFLNSLKEKIDS 104
7***********6444479*******************************************************************************99 PP
DUF260 97 lkee 100
+k+e
Tp7g20710 105 TKKE 108
9987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MALRPCAACK VLNSSCTMVP PQECIFAPFF PSTEPEKFDR VHRVFGAENV YKILANVKPW 60
ERETAVSSLC YEAEARIQDP ISGYVGMQSI LENFLNSLKE KIDSTKKELA AIVGPEKVPQ 120
FSEFLMSGDV LNTPASLFAF IDGMEELTEA HKYVLKQLPF STAKGIVRNI VTNREDEEMV 180
DVPGAAGAST SAGPSVAAGS TGNTQRMPPQ NQNKP
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 6e-31 | 5 | 109 | 11 | 111 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 6e-31 | 5 | 109 | 11 | 111 | LOB family transfactor Ramosa2.1 |
