PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp7g06350
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family SAP
Protein Properties Length: 457aa    MW: 50373.6 Da    PI: 6.4043
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp7g06350genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP742.43.7e-22614561454
        SAP   1 mssssssssseseegseggeggdassgesegpsssrqr.aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrr 99 
                msssssss++ ++ g  ++  +++s+g +++ps sr+r  an+vwpePfle+la+qva+das s+G laaa+alanvf+vc+ w+avsrsd+lwq ltr+
  Tp7g06350   1 MSSSSSSSDNGDSGGGPSSV-SGRSGGVFDAPSPSRPRhGANDVWPEPFLESLAVQVAVDASLSAGLLAAAPALANVFRVCTMWQAVSRSDHLWQLLTRQ 99 
                78888777776666654444.467779**********9889*********************************************************** PP

        SAP 100 iWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlGrfsr 199
                +W+rt+l++dtWr+e+iy+hrtarnfrtr+y ++tl+fdp+dvde   +d+lsCrcl+lsd ylaaGfadG+vrlf l++rlhv+t++p  rdr+Grfsr
  Tp7g06350 100 VWARTHLMHDTWRDEFIYHHRTARNFRTRTYVHFTLNFDPSDVDE---PDSLSCRCLTLSDLYLAAGFADGTVRLFLLNNRLHVRTLHPPLRDRFGRFSR 196
                *****************************************9998...689************************************************* PP

        SAP 200 avsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlt 299
                avsGivisdsrlvfat+dGdihva+i+g+ ++++r+a++Gd+vndGalvdf+G+gr+wvGl+aGvpGrafh+Wd+++ee++fvGGsltdPeavmGWh+lt
  Tp7g06350 197 AVSGIVISDSRLVFATMDGDIHVAEINGV-SGHTRTAFVGDIVNDGALVDFTGCGRYWVGLFAGVPGRAFHVWDCNSEETTFVGGSLTDPEAVMGWHTLT 295
                ****************************5.59******************************************************************** PP

        SAP 300 eltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggy 397
                elt+++Gr+r+++ et+vaCt++r++v+dlrnqgv+++e+ee+ rGl v+++da++eayv++dsrG+a+vrrv + e+vc+frv+g aqr+v+ Cvn+ +
  Tp7g06350 296 ELTTSLGRLRISGGETVVACTRWRIMVIDLRNQGVIIGEDEEQrRGLTVTGFDANDEAYVRMDSRGNAIVRRVRTQETVCEFRVSGaAQRRVMCCVNRLH 395
                *************************************99888779*****************************************9************* PP

        SAP 398 alvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss....dgtihlldfga 454
                al++aggv+rvWe+e++++ylys+rervgev+a+vaddrhvav+ss     +tihl+dfga
  Tp7g06350 396 ALMCAGGVMRVWEVEREGEYLYSFRERVGEVDAIVADDRHVAVASSsstaVSTIHLWDFGA 456
                *******************************************9984444468*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813831.01E-572123IPR001810F-box domain
Gene3DG3DSA:1.20.1280.501.4E-472129No hitNo description
SuperFamilySSF509781.1E-11146326IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.9E-9151236IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.9E-9359454IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509781.1E-11370453IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MSSSSSSSDN GDSGGGPSSV SGRSGGVFDA PSPSRPRHGA NDVWPEPFLE SLAVQVAVDA  60
SLSAGLLAAA PALANVFRVC TMWQAVSRSD HLWQLLTRQV WARTHLMHDT WRDEFIYHHR  120
TARNFRTRTY VHFTLNFDPS DVDEPDSLSC RCLTLSDLYL AAGFADGTVR LFLLNNRLHV  180
RTLHPPLRDR FGRFSRAVSG IVISDSRLVF ATMDGDIHVA EINGVSGHTR TAFVGDIVND  240
GALVDFTGCG RYWVGLFAGV PGRAFHVWDC NSEETTFVGG SLTDPEAVMG WHTLTELTTS  300
LGRLRISGGE TVVACTRWRI MVIDLRNQGV IIGEDEEQRR GLTVTGFDAN DEAYVRMDSR  360
GNAIVRRVRT QETVCEFRVS GAAQRRVMCC VNRLHALMCA GGVMRVWEVE REGEYLYSFR  420
ERVGEVDAIV ADDRHVAVAS SSSTAVSTIH LWDFGAL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp7g06350
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013721150.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A397ZJ070.0A0A397ZJ07_BRACM; Uncharacterized protein
STRINGAT5G35770.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]