PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp6g37990
Organism
Thellungiella parvula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family bZIP
Protein Properties Length: 308aa    MW: 33485.5 Da    PI: 7.7413
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp6g37990genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.88.1e-071842291863
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +rsR RK+++i+eLe++v  L+a   +L  ++ +l ++ a+l  e+
  Tp6g37990 184 QRSRVRKLQYIAELERRVSMLQAVEADLSVRVASLLQTRATLSLEN 229
                79******************************99999999988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147034.33E-15178223No hitNo description
Gene3DG3DSA:1.20.5.1708.7E-6184236No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MSRPAQLPPR CPIPKKLSLN PVADTYYSSS SPIESYIGQC KSSTQDSTLE DQPAWLDELL  60
REKTDGMLTG GGPPLRRSAS DSVVLLGDIS AAFAGFNQSE DEESLTSEAC GELESACVYG  120
PNSPRARNNP SFSNNPIASA FSDYGTQKPP QNSEDTVNGI NCSPVAENAC GSMSVPNAKR  180
NPGQRSRVRK LQYIAELERR VSMLQAVEAD LSVRVASLLQ TRATLSLENS QMKQQMAILK  240
QDKLIGEGEY QLLKKEAQRL KSGLGNFGSN NNNNRLVRSY SAGSNIGPRT ASSHLDWKLL  300
DLTKLNLN
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp6g37990
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0998810.0AY099881.1 Arabidopsis thaliana unknown protein (At5g04840) mRNA, complete cds.
GenBankBT0087100.0BT008710.1 Arabidopsis thaliana At5g04840 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010491005.10.0PREDICTED: basic leucine zipper 6
TrEMBLA0A1J3JJZ00.0A0A1J3JJZ0_NOCCA; Basic leucine zipper 2
STRINGXP_010491005.10.0(Camelina sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1364279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.23e-19bZIP family protein