 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp6g37320 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
Trihelix |
| Protein Properties |
Length: 251aa MW: 28542.5 Da PI: 9.5475 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g37320 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 44.2 | 4.9e-14 | 33 | 114 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W+++ + +Li+a + rl+ g+l++++W+e+++++ + g ++ qCk++++ l+k+yk++k+ + s +++f++l+
Tp6g37320 33 WSEDATATLIQAWGHRFLRLNFGNLRQNDWKEIADAVnssHGNGRPKTDAQCKNRIDTLKKKYKAEKAKLSP------SAWRFFHRLD 114
*************************************9666667788********************99986......57*****997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
METTTPPPAT QSKPHQPISS GSHRPPVGRE DWWSEDATAT LIQAWGHRFL RLNFGNLRQN 60
DWKEIADAVN SSHGNGRPKT DAQCKNRIDT LKKKYKAEKA KLSPSAWRFF HRLDVLIGPV 120
LKKPASGDVK STSLNPYLSL TGSKYTESSL DDDDEEAGDW GFVARKHPRL EEVDLSDGLA 180
CKELARAILK LAEVYERIEG TKQKMMIELE KQRMEVVKEL ELQRMNMLME MQLELEKSKN 240
RKRGDGSGKK L
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G05550.1 | 1e-102 | sequence-specific DNA binding transcription factors |
