PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp6g36050
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family G2-like
Protein Properties Length: 134aa    MW: 15472.9 Da    PI: 10.163
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp6g36050genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like962.8e-302781155
    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               k+r++Wt++LH++F+++v++LGG+ kAtPk il+lm  + Lt++hvkSHLQkYR+
  Tp6g36050 27 KTRIKWTTDLHDKFLDCVNHLGGPMKATPKGILKLMRTNELTIYHVKSHLQKYRS 81
               68****************************************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.7042484IPR017930Myb domain
SuperFamilySSF466892.15E-152681IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.6E-272683IPR009057Homeodomain-like
TIGRFAMsTIGR015579.6E-242781IPR006447Myb domain, plants
PfamPF002495.7E-83180IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MAEKEQPSTR SSSCESACEL TCPSSIKTRI KWTTDLHDKF LDCVNHLGGP MKATPKGILK  60
LMRTNELTIY HVKSHLQKYR SLKHVQDSIQ GTRFKEEKIN PKGSRIKELM RLQDEVGQHL  120
QEQLEKSRIR VIKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-212784158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-212784158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-212784158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-212784158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-212784259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp6g36050
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018511282.12e-56PREDICTED: myb family transcription factor PHL5-like isoform X2
SwissprotQ0WVU33e-27PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A087G5B67e-59A0A087G5B6_ARAAL; Uncharacterized protein
STRINGA0A087G5B61e-59(Arabis alpina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1952777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.24e-30G2-like family protein