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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp6g24910 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
NF-YC |
| Protein Properties |
Length: 259aa MW: 28986.1 Da PI: 5.6648 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g24910 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 55.6 | 1.2e-17 | 6 | 86 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
++++P +rikki+++dedv +i+ +P l+ska elf+ +l ++ + + +t++ ++++v ++fdfl +iv +
Tp6g24910 6 QTRFPATRIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNSVHLKQCVHAFNVFDFLREIVGK 86
789*************************************************************************99865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MKKKLQTRFP ATRIKKIMQT DEDVGKIAMA VPLLVSKALE LFLQDLCNHT YDVTLSRGAK 60
TVNSVHLKQC VHAFNVFDFL REIVGKVPDL GGSETEDGSA TKRRKVIEES ICNDEDMKTT 120
EMHEAKHTGS GRGRRGRGRG RGGGRTGNGQ SLKFEDGLEG VSPESSSNPS PEDWSLSHDG 180
ASWKKVASHN DNQRNSELKV RNFDLNVELD ENGDFATSPE RRVEGRPGWP LFRINEIKID 240
HDQQASANEE DYDEESMDE
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 131 | 141 | RGRRGRGRGRG |
