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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Tp6g14130 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
MIKC_MADS |
| Protein Properties |
Length: 218aa MW: 25335.4 Da PI: 9.6264 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g14130 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 89.9 | 1.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
k+ien + rqvtfskRr g++KKA+ELSvLCda+va i+fs++g+lye+ss
Tp6g14130 9 KKIENVTSRQVTFSKRRRGLFKKAHELSVLCDAQVAAIVFSQSGRLYEFSS 59
68***********************************************96 PP
|
| 2 | K-box | 65.7 | 1.6e-22 | 88 | 172 | 14 | 98 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98
++l++e++ + k+i+ L+ +qR+l+G++L+s+s+ eLq++ +q+eksl +Rs+K el+ +q+++l +ke+el ee ++Lr++
Tp6g14130 88 LQELKKEMDIMVKKIDLLEVNQRKLMGKSLSSCSMAELQEIGTQIEKSLYIVRSRKAELYADQLRKLNEKERELLEERRRLREEE 172
6899******************************************************************************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MVRGKIEIKK IENVTSRQVT FSKRRRGLFK KAHELSVLCD AQVAAIVFSQ SGRLYEFSSY 60
DMEKTIERYG KFSNDYYVAG RPKVELYLQE LKKEMDIMVK KIDLLEVNQR KLMGKSLSSC 120
SMAELQEIGT QIEKSLYIVR SRKAELYADQ LRKLNEKERE LLEERRRLRE EEARERLMQP 180
LLPLILHSGT GEAEGGCRTK HSSEVETDLF IGLPVARL
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | MADS-box transcription factor that acts with AGL42 and AGL72 in the control of flowering time. Promotes flowering at the shoot apical and axillary meristems. Seems to act through a gibberellin-dependent pathway. Interacts genetically with SOC1 and its expression is directly regulated by SOC1. {ECO:0000269|PubMed:21609362}. |
