 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp6g04460 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
WRKY |
| Protein Properties |
Length: 521aa MW: 57247.4 Da PI: 6.9024 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g04460 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.5 | 4.1e-31 | 282 | 340 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
Tp6g04460 282 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 340
8*********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 521 aa
Download sequence Send
to blast |
MFRFPVSLGG SHDNPKQPQP SDEQNHRAMM DEVDFFRSEK RDDQNIITDQ TDRVHVKREK 60
LRVVDDDDDR STGINTGLNL LTANTGSDES MVDDGLSVDM EEKRTKSENA QLREELKKMA 120
EDNQRLKEML SQTTNNFNSV QMQLVSVMRQ QEDHHHLATT ERKDKANKRH EAPEIVPRQF 180
IDLGVPSAEV SSEERTTVRS GSPPSLLENS GSGQRGKRIR EREESPETES NGWGNPNNIS 240
KHKVSSTNCN GNGNAIDQSA AEATMRKARV SVRARSEAPM LNDGCQWRKY GQKMAKGNPC 300
PRAYYRCTMA VGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAMYMAS TTTAAASMLL 360
SGSTMSSQEG LMNPSNLLAR TMLPCSSSMA TISASAPFPT ITLDLTESAS NVNSPTNNNP 420
LMQFSQRPGF AELNQSGLSQ MMGQALYYNQ QQSKFSGLEI PSQSLNAGES VTASTAAIAA 480
NPNFAAALAA AITSIINGSN NHQNRNNSSN SNVRTSSVDR Q
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ384110 | 0.0 | FJ384110.1 Brassica napus cultivar Westar WRKY transcription factor 42 (WRKY42) mRNA, WRKY42-2 allele, complete cds. |
