 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp6g02550 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
bZIP |
| Protein Properties |
Length: 415aa MW: 46000.4 Da PI: 5.3265 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g02550 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 52 | 1.5e-16 | 223 | 276 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
++k+ rr+ +NRe+ArrsR+RK++++ Le+ v eL++e ++L k+l++++ ++
Tp6g02550 223 DVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNELKGEHSSLLKQLSNMNHKY 276
789*****************************************8888887665 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002240 | Biological Process | response to molecule of oomycetes origin |
| GO:0009626 | Biological Process | plant-type hypersensitive response |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000693 | Biological Process | positive regulation of seed maturation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MNSIFSIDDF SDPFWEAPPS LNSDSAKVTT AEEVSQSQPE WTFEMFLEEI SSSVSSEPVG 60
NNNNNPIVGV SSAQSLPSVS GQNDFEDDSR YRRDHRDRDS GNRDSAPPLS STVIVDSDDY 120
HHVLKNRLET ECATAVALRA GSVKPEESTS SLETQFQPGQ SSPLTQGSLM TPGEVGVSSS 180
LPAEMKKAGV PMKQVTSGSS REYSDDEDLD EENETTGSLK PEDVKKSRRM LSNRESARRS 240
RRRKQEQTSD LETQVNELKG EHSSLLKQLS NMNHKYDDAA VGNRILKADI ETLRAKVKMA 300
EETVKRVTGT NPMLLRRSNG HNNNNRMPLT GNNRMDSSCI PAFQPQSNLN HLLNPNIGVP 360
PILHSRIGND FIPPPSLNSH TNSHLQRIRN TQNHYVAPSA NPYGWTTEPQ NDSAW
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 237 | 244 | RRSRRRKQ |
| 2 | 239 | 244 | SRRRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK353546 | 0.0 | AK353546.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-51-H19. |
