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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp6g01610 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
WRKY |
| Protein Properties |
Length: 477aa MW: 52880.6 Da PI: 6.5564 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g01610 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.6 | 4e-31 | 233 | 292 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
Tp6g01610 233 VNDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILTTTYEGNHNHP 292
58*********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MEEHSQDRRE IEFLHSGEFL RRDSISKDQQ SNESPVEYDH HKPSIKEVDF FAAKSQPYDL 60
GHMRTTVVGS SGFNDESILE DSRLGTSCVA GDDKTKTQIS RLNVELERLH EENHKLKHLL 120
DEISKSYNDL QSRFLLARET QVEGLQQHED TLQAVFAQGL ENRRPMDMNN EMSGTTLKRR 180
SPDDRDLHEA SPKPPRLDQN NSDKHEEQQN PHDQLPFRKA RVSVRARSDT TTVNDGCQWR 240
KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDTTI LTTTYEGNHN HPLPPSATAM 300
AATTSAAAAM LLSGSTISNI HQTLCTPSAT SSSSFYNNFP YTSTIATLSA SAPFPTITLD 360
LTNPPRPLQP PLPPQFLSQY GPTAFLTNAR SISNNNNTQL LLPNLLGPQA PPHDMVDTVR 420
AAIAMDPNFT AALAAAISNI IGGGNHNNNN NNDNNKVDSK NGDSPQLPQS CTTFSTN
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
