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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp6g00870 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
WRKY |
| Protein Properties |
Length: 299aa MW: 32408.8 Da PI: 7.5 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp6g00870 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.3 | 2.1e-30 | 130 | 188 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver++++p+++++tY+ eHnh+
Tp6g00870 130 SDVWAWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSNPTMFIVTYTAEHNHP 188
69************************9988****************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010150 | Biological Process | leaf senescence |
| GO:0010200 | Biological Process | response to chitin |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MADDWDLHAV VRGCSSVSSS ATTTTTVFSG GVSSQTSPMF TFERQSNAVV FGEIRDLYTP 60
FTQESNVSSF SCLKYPEEPR QRQNQKRPLS LSASSGSVTS KPTGSNTSRS KRRKIQHKKV 120
CHVAAEALNS DVWAWRKYGQ KPIKGSPYPR GYYRCSTSKG CLARKQVERN RSNPTMFIVT 180
YTAEHNHPAP THRNSLAGST RQKSSDQPTT KSPTTTIVTY SSSPVTSTDE IVLPVEDIAV 240
GDLDGDEDLL SLSDTVVSED FFEGLEEFAA GDSFSGNSAP ASFDLSWVVS SAATASGGI
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters. {ECO:0000269|PubMed:11875555}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced after flagellin treatment. {ECO:0000269|PubMed:11875555}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY166720 | 0.0 | AY166720.1 Capsella rubella WRKY transcription factor 22 (WRKY22) mRNA, complete cds. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Coego A, et al.
The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression.
Plant J., 2014. 77(6): p. 944-53
[PMID:24456507] - Gkizi D, et al.
The Innate Immune Signaling System as a Regulator of Disease Resistance and Induced Systemic Resistance Activity Against Verticillium dahliae.
Mol. Plant Microbe Interact., 2016. 29(4): p. 313-23
[PMID:26780421] - Kloth KJ, et al.
AtWRKY22 promotes susceptibility to aphids and modulates salicylic acid and jasmonic acid signalling.
J. Exp. Bot., 2016. 67(11): p. 3383-96
[PMID:27107291] - Camborde L, et al.
Detection of nucleic acid-protein interactions in plant leaves using fluorescence lifetime imaging microscopy.
Nat Protoc, 2017. 12(9): p. 1933-1950
[PMID:28837131] - Wang S, et al.
Bacillus cereus AR156 Activates Defense Responses to Pseudomonas syringae pv. tomato in Arabidopsis thaliana Similarly to flg22.
Mol. Plant Microbe Interact., 2018. 31(3): p. 311-322
[PMID:29090631]
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