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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp5g35180 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
|
| Family |
WRKY |
| Protein Properties |
Length: 260aa MW: 29877 Da PI: 5.986 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp5g35180 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 67.6 | 1.9e-21 | 104 | 164 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK++k s + r YYrC++a +C++ k+v++ ++ p++ +tY g+H ++
Tp5g35180 104 NDGFSWRKYGQKKIKTSSHQRCYYRCAYAkdrNCNAAKRVQQIQDSPSLYRTTYVGKHICD 164
8***************************99999*************************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MFHGVDKAVE ALLRGQESAN RLKTVLEHHR TSPVPTEPLF DTVLDSFSLA LSLFTNSTSS 60
NSRPHRASSQ NAASFVARKS RKKTSYEDNG SEHYTYDSPS PLHNDGFSWR KYGQKKIKTS 120
SHQRCYYRCA YAKDRNCNAA KRVQQIQDSP SLYRTTYVGK HICDVNAFSQ PHDDITNGST 180
MIRFDKLDQD MSESVMPQFV PVEHQEITIE DECKDQITNQ EFDYKDFLVD DEQFCAYQFP 240
PGNSMFVDDI SVFDYNPFDL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
