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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp5g15040 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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| Family |
G2-like |
| Protein Properties |
Length: 339aa MW: 35945.5 Da PI: 5.6746 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp5g15040 | genome | thellungiella | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 95.1 | 5.4e-30 | 158 | 211 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
Tp5g15040 158 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 211
59*******************.********************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MGEEVRMNDY DVSGDGDRVL EWEMGLPSDE DLAALSYSLI PSNLAMAFSI APEKSRTIQD 60
VNRASETTLS SLRSGSSGPN TSSSNNNSNS FKTGVAVEEE DRVGSSSPGS DSKKQKTSDD 120
AGDGGGGGGG DVDLSTVDAA AEEGDSGTED PTGKTLKRPR LVWTPQLHKR FVDVVAHLGI 180
KNAVPKTIMQ LMNVEGLTRE NVASHLQKYR LYLKRMQGLT TEGPSSSDKL FSSTPVPPQS 240
FQDIGGGSGQ GNGSAGHVGM PIPVPYGAPP MMQMPVYAHH MGMQGYHHQN HGHDPYHQNH 300
HHGTGGPGAF EANPYMMQQN KFGSMASYPS VGGGSANEN
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that is essential for the generation of the circadian clock oscillation. Is necessary for activation of CCA1 and LHY expression. Is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. Directly regulates the expression of PRR9, a major component of the morning transcriptional feedback circuit, by binding specific sites on PRR9 promoter. Binds to its own promoter, inducing a negative auto-regulatory feedback loop within the core clock. Binds to ELF3 and associates with ELF4 in a diurnal complex which is required for the expression of the growth-promoting transcription factors PIF4 and PIF5 and subsequent hypocotyl growth in the early evening. {ECO:0000269|PubMed:16006522, ECO:0000269|PubMed:16164597, ECO:0000269|PubMed:21236673, ECO:0000269|PubMed:21753751, ECO:0000269|PubMed:22311777}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian oscillation with peaks at subjective dusk. {ECO:0000269|PubMed:16006522, ECO:0000269|PubMed:16164597, ECO:0000269|PubMed:17132630, ECO:0000269|PubMed:21753751}. |
