PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp5g05900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | bZIP | ||||||||
Protein Properties | Length: 704aa MW: 76411.5 Da PI: 5.0175 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.1 | 1.2e-15 | 237 | 296 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr r+++NRe+A+ sRqRKk ++eeLe+kvk+L++ ++L ++++ e a+l+++v Tp5g05900 237 EKRNTRLIRNRESAQLSRQRKKHYVEELEDKVKNLKSTITDLNSKVSYFMAENATLRQKV 296 599***************************************************999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.8E-16 | 234 | 298 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.645 | 236 | 296 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.5E-14 | 238 | 296 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.03E-12 | 238 | 295 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.5E-17 | 238 | 296 | No hit | No description |
CDD | cd14704 | 1.69E-21 | 239 | 290 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 704 aa Download sequence Send to blast |
MAETVVEENH TPYTGLPSFS SEFDSISILP PPPFGDNFYN SSSDQALLGN SISDLMFSID 60 GDRDGDFELT FDCVDDLYFP DENESFVIPV DATDREMSGD FTPVLGGISG DMNTNCVVST 120 SGCCNRESPM DFDCSEAILD CFFTAQSLSL STGESADCVP DVSEATIASS TSSESGKVVV 180 DQKFKVEEEA TTYKTPITKR KKEVEEEDTS EESRNNKYRR SDEDGAVTDG GGEVDDEKRN 240 TRLIRNRESA QLSRQRKKHY VEELEDKVKN LKSTITDLNS KVSYFMAENA TLRQKVGPGN 300 GVCRPRHQLP PSSGMYPPLA PMPYPWMPFP AYMVTQQGSQ VPLLPIPRLK PQQSVAKVKK 360 SEVKTKKVAS VSFFGLLFCL FLFGALAPIV NVSYGGISGV FYDEYGQLRG RVLGVNGHLD 420 VSVNSSRKHC GRGSDQGTGR NVSATENSVP PGNGSELLVA SLFVPRNEKL VKIDGNLIIH 480 SILASEKDMG SETKNEGKSG VASTKGNSPA LRLSDSTMTK GMSKHLNSEK RKALSSSGSD 540 ESEDKLNSTK ANGEMQQWFR ECVAGPMFSS GMCTKVFQFD VSSTSGAIIP ASPATQQPKN 600 TTNIDKGNNN RRFLRGGLPV SDFTLTKDQK SSSKENFGAT KPFTSMVVSV LVGPREGSDG 660 DIDSITGGTK SLSRVFIVVL VDGVKYVTYS CVLPQPEVPH LVTS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in stress responses. {ECO:0000250|UniProtKB:O22208}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp5g05900 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006402962.1 | 0.0 | bZIP transcription factor 49 | ||||
Swissprot | Q9LXX4 | 0.0 | BZP49_ARATH; bZIP transcription factor 49 | ||||
TrEMBL | V4L296 | 0.0 | V4L296_EUTSA; Uncharacterized protein | ||||
STRING | XP_006402962.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16991 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56660.1 | 0.0 | basic region/leucine zipper motif protein 49 |
Publications ? help Back to Top | |||
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