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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA922 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
FAR1 |
Protein Properties |
Length: 253aa MW: 29462.1 Da PI: 7.0659 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA922 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 83.7 | 2.9e-26 | 75 | 165 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtklele 84
+fYn+Y++++GF+vr++++++s+ n+e++ ++fvCskeg+r+++ +++++ + + tr gC+a++++++++ gkw+v+k+++e
Tp57577_TGAC_v2_mRNA922 75 EFYNAYGRRIGFTVRVHHNRRSRINKEVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPPTREGCQAMVRMTLTDGGKWVVAKFVKE 159
6******************************************99883333.2448899*************************** PP
FAR1 85 HnHela 90
H+H+l+
Tp57577_TGAC_v2_mRNA922 160 HTHKLM 165
****97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MMDHQSGQGF DSYGSDPNVI AETSEKHDKV DVDISNNLEL CAGEDERFVE QPVADSDTIE 60 PFIGMEFNSR EEAREFYNAY GRRIGFTVRV HHNRRSRINK EVIGQDFVCS KEGFRAKKYV 120 HRKDRVLPPP PPTREGCQAM VRMTLTDGGK WVVAKFVKEH THKLMSPSEV PWRRSEKHLI 180 SEDEKDRRIR ALSLELYNER QKYKRRCAAY EEQINMILND VERHTEHISK KVADVVRNIR 240 EIEEEKSESN GR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC146574 | 1e-171 | AC146574.6 Medicago truncatula clone mth2-145j21, complete sequence. |