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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA7823 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
bHLH |
| Protein Properties |
Length: 469aa MW: 52218.5 Da PI: 6.1554 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA7823 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 49.5 | 7.5e-16 | 261 | 307 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq
Tp57577_TGAC_v2_mRNA7823 261 VHNLSERRRRDRINEKMKALQELIPRS-----NKSDKASMLDEAIEYLKSLQ 307
6*************************7.....5******************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006783 | Biological Process | heme biosynthetic process |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009959 | Biological Process | negative gravitropism |
| GO:0010100 | Biological Process | negative regulation of photomorphogenesis |
| GO:0010161 | Biological Process | red light signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0015995 | Biological Process | chlorophyll biosynthetic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0010313 | Molecular Function | phytochrome binding |
| GO:0042802 | Molecular Function | identical protein binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 469 aa
Download sequence Send
to blast |
MLFCGMNHCV PDFNSQMDQQ LLPRPKKPFI ADDEIMELLW QNGQVVTQSQ NNRHVNKQPP 60
GRNSDGGTSS EVENNNQFLF MQEGEMASWL HYPINNDHDD DHDSPFSADF LNNNNSSMQT 120
PHRTSQLTEL RRNPMSVAPS RPPNPLQRRS EQVQPNFAYF ARHGVRAEPG SSSILRNSAR 180
ESTVVDSCDT PATMLAAGSE TVRSLADHTE GETGVSAPST TMKGRETEEW EYQSEDVDFE 240
SAEAKKNVSG SSTKRSRAAE VHNLSERRRR DRINEKMKAL QELIPRSNKS DKASMLDEAI 300
EYLKSLQLQV QMMSMGCGMV PMMFPGIQQY MPTIGMGMGM GMGMEMGINR PIMPFPNMLS 360
GSALPAAANL GPRFAAMPPF HVPHVPTPDS SRMQATNQAV SNILTSVGTY DSNQSHIPNF 420
TDPYQQYLGP HQMQFQSMQS RAMNQPNVGK PSITRPLENP EIHQSGDK*
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