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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA6885 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
ERF |
| Protein Properties |
Length: 218aa MW: 24470.8 Da PI: 6.7957 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA6885 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.5 | 9.3e-20 | 53 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ +++Wv+e r p++n+ + r++lg++ t+e+Aa+a++ a++ l+g
Tp57577_TGAC_v2_mRNA6885 53 PVYRGVRRRN-NNKWVCEMRIPNKNNkSNkSRIWLGTYPTPEMAARAHDVAALTLRG 108
68*****887.8*********999776446*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009408 | Biological Process | response to heat |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
| GO:0016049 | Biological Process | cell growth |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0050826 | Biological Process | response to freezing |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MDFFMSLSGE YSDTSSSETS SSNLISSSSE VILASTKPKK QAGRRVFKET RHPVYRGVRR 60
RNNNKWVCEM RIPNKNNKSN KSRIWLGTYP TPEMAARAHD VAALTLRGKS ACLNFADSAW 120
KLRLPESNDA VEIRRAAMEA AKLFAVEDGV VLDDMEDSKK NVLNVQVPVV ASEFEELHDL 180
LLIIANEPLR SPPPSMNDYW GDMEIFDTPI SLWNFSI*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}. |
| Publications
? help Back to Top |
- Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
Plant Signal Behav, 2014. 9(3): p. e28211
[PMID:24614501] - Kazama D, et al.
Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
Plants (Basel), 2013. 2(4): p. 769-85
[PMID:27137403] - Song GQ,Gao X
Transcriptomic changes reveal gene networks responding to the overexpression of a blueberry DWARF AND DELAYED FLOWERING 1 gene in transgenic blueberry plants.
BMC Plant Biol., 2017. 17(1): p. 106
[PMID:28629320] - Imran QM, et al.
Transcriptome profile of NO-induced Arabidopsis transcription factor genes suggests their putative regulatory role in multiple biological processes.
Sci Rep, 2018. 8(1): p. 771
[PMID:29335449]
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