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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA6823 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bHLH |
Protein Properties |
Length: 409aa MW: 46171.2 Da PI: 5.5278 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA6823 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 24.9 | 3.8e-08 | 314 | 354 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r+RR+ri +++ L++++P +K++ a++L +A +Y+k L
Tp57577_TGAC_v2_mRNA6823 314 ARQRRERISERIRVLQKIVPGG-----TKMDTASMLDEAANYLKFL 354
69******************87.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 409 aa
Download sequence Send
to blast |
MDSLSWNDDS QLVANIPILW NTQPQDLERD YSMSNPSSSV FNYQMQDMQK IQSEAETSWE 60 ETLIFQSYPS LSVNINTPNN YVPDFNMSHQ QNSKSTTTAT CSLESSLDCL LSATTNSNTD 120 TNSIQDDGIS MIFSDCKNRN SWNFNAVSSV EYESTNARNK DMQYPFKEIE ETLSQISSDK 180 GKIIDSNSKV HSTKRTKIDQ YDPYNYNFNI TQNSSSTEFG FKLISEKPPK SKKPRWDNKC 240 QGSSNINFQQ PNSSMSLSNS SIHEEPDPEA IAQMKEMIYR AAAFRPVMNL GLEAVEKPKR 300 KNVKISNDPQ TVAARQRRER ISERIRVLQK IVPGGTKMDT ASMLDEAANY LKFLRSQVKA 360 LENLGNKIDT MKNCPSTSIA FSSNPSNSMQ STHFPIQNPN DNIQYSQG*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC125390 | 0.0 | AC125390.32 Medicago truncatula clone mth2-17c11, complete sequence. |
GenBank | AC187466 | 0.0 | AC187466.2 Medicago truncatula chromosome 2 BAC clone mth2-69p21, complete sequence. |