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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA42196 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
FAR1 |
| Protein Properties |
Length: 355aa MW: 40572.5 Da PI: 4.9898 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA42196 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 29.9 | 1.8e-09 | 86 | 144 | 1 | 59 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetr 59
+fY +Y+k+ Fsvrks+ ks +ge ++tf Cs g++e++ + ++++rr+r etr
Tp57577_TGAC_v2_mRNA42196 86 QFYTTYSKMYDFSVRKSNVVKS-SKGELLQQTFICSSAGYTENKGLNvDNRKRRERRETR 144
6*******************99.7788****************99996666777777776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
NNCQEDPEHI NEDVDESEDG DDSSEENFLE QNSEIGDDNC GDYVDSCEEE EIVIDDLDDI 60
LKIGMKNIVS NDVSRYYFSN LEVAYQFYTT YSKMYDFSVR KSNVVKSSKG ELLQQTFICS 120
SAGYTENKGL NVDNRKRRER RETRAMVVTL FTNEHNHEMV KDIYCQMLPG HKKITKADAL 180
VIHNHAKVGI RPSTTYGAFA HALGGYNKVQ FMKKDLYNQI GKQKRQQVSD ASAAVKYLKE 240
LKSKDPMMFV KFTTDSDKRL QHLFWVDGES QMNYKVFSDI VAFDATYRKN KYLCPLVIFS 300
GVNHHNQTIV FATGLVSNET EETYVWLLEQ FLEVMGGKAP SSVITDGDLA MKNAI
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 134 | 141 | RKRRERRE |
