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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA4206 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
TCP |
| Protein Properties |
Length: 295aa MW: 31509 Da PI: 10.1009 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA4206 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 119.6 | 3.9e-37 | 63 | 227 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85
a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ s s +sn+
Tp57577_TGAC_v2_mRNA4206 63 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSsL--SVSLRGSNN 145
78**************************************************************9999976642..333333333 PP
TCP 86 ssg..............................................................................k 89
s + +
Tp57577_TGAC_v2_mRNA4206 146 SLPspsstslehkpllspspfilgkrirtdddsssssahakedalsvaslstpaalwalpsrpdfgqiwsfaaaaagapqpE 227
3334455566777777777777776666666555555555556666666666666666666666666666666666655432 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MKSSVPSFSI THSHTLSFSL HPSTTLIPSL HPSIHQNMSN TDGTTTTTTT NGSIIDQNRQ 60
HLAVKKPPSK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI 120
IAATGTGTTP ASFSSLSVSL RGSNNSLPSP SSTSLEHKPL LSPSPFILGK RIRTDDDSSS 180
SSAHAKEDAL SVASLSTPAA LWALPSRPDF GQIWSFAAAA AGAPQPEMVI QSLSQQQQQQ 240
HQASFFSHHH HQQQQAMGEA SAARVGNYLP GHLNLLASLS GGHGNSGRGD DEHH*
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