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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA41115 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
FAR1 |
| Protein Properties |
Length: 236aa MW: 26670.1 Da PI: 6.3915 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA41115 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 64.6 | 2.7e-20 | 85 | 173 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83
fY+ +Ak+ GFsvrk + ++ ++g+i ++tf Cs+eg+re++ + ++++r++++etr+ C+ak +v+ + + +w+vt le
Tp57577_TGAC_v2_mRNA41115 85 FYCWFAKTSGFSVRKGHVVRN-HEGNILQQTFLCSCEGFREDRGLTlENRKREPKNETRCWCNAKCRVHVDIvSMRWYVTLLEI 167
9*****************999.7788*****************9997889999****************9999*********** PP
FAR1 84 eHnHel 89
+H+H+l
Tp57577_TGAC_v2_mRNA41115 168 DHTHDL 173
****99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 236 aa
Download sequence Send
to blast |
LGTDISNGGP SYSVGGGSSN PDESLDGSFD EIWNDTEDQS FGYGCEVEAV VIKDMADIMK 60
IDLNNFRVAD VRKYEFVGLD VAYMFYCWFA KTSGFSVRKG HVVRNHEGNI LQQTFLCSCE 120
GFREDRGLTL ENRKREPKNE TRCWCNAKCR VHVDIVSMRW YVTLLEIDHT HDLLGVTLCG 180
LLPAHRKMSQ GDIDEIERNR KAGIRPYQVY GSMANTSGGF HKVGFVKKDL YNQVGK
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