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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA38968 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
ERF |
Protein Properties |
Length: 184aa MW: 21199.7 Da PI: 10.766 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA38968 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 75 | 124 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f t+++Aa+a++ a++ ++g
Tp57577_TGAC_v2_mRNA38968 75 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTPDMAARAHDVAALTIKG 124
69****998.**********843...6**********************99876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MEREDSFQTH ELCLQPTTSL SSSIIVSTSN SSSEEEATNI KTKKLSNSTK KEKKKKKVAM 60 VNRVIHKNDD MKHPTYRGVR MRQWGKWVSE IREPRKKSRI WLGTFPTPDM AARAHDVAAL 120 TIKGSSAYLN FPEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XFEPSRSHTR 180 FKT*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 42 | 56 | KKLSNSTKKEKKKKK |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC119408 | 4e-75 | AC119408.27 Medicago truncatula chromosome 8 clone mth2-5f18, complete sequence. |
GenBank | AC149079 | 4e-75 | AC149079.9 Medicago truncatula chromosome 8 clone mth2-75i8, complete sequence. |