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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA3810 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
AP2 |
Protein Properties |
Length: 418aa MW: 46806.2 Da PI: 8.9945 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA3810 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.1 | 3.7e-17 | 59 | 118 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g
Tp57577_TGAC_v2_mRNA3810 59 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 118
57*******************766644468557*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 418 aa
Download sequence Send
to blast |
MASSSSDHGK SAENSEALAV ANDQLLLYRG LKKAKKERGC TAKERISKMP PCAAGKRSSI 60 YRGVTRHRWT GRYEAHLWDK STWNQNQNKK GKQVYLGAYD DEEAAARAYD LAALKYWGPG 120 TLINFPVTDY TRDLEEMQNV SREEYLASLR RKSSGFSRGL AKYRGLSRRW EPYGRLTGSD 180 YFSSMHYGTG DDSAAESEYV SGFCIERKVD LTNHIKWWGS NKNRQPDAGT RLSEEKKHGF 240 AGGDIYSELK TLEQKVQPTE PYKLPELGRL HNEKKHKSSS MSALSILSQS AAYKSMQEKA 300 AKRQESSTDN DENENKNIVN ELDRGKAVEK PSNHDGGNDR LDIAMGMSGA LSLQRNVYPL 360 TPFLSAPLLT TYNTVDPLVD PALWTSLIPM LPASLSRPAE VTKTETDSTY TIYQPEE*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |