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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Tp57577_TGAC_v2_mRNA37526 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
FAR1 |
| Protein Properties |
Length: 210aa MW: 24784.3 Da PI: 9.9405 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA37526 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 62.9 | 9.2e-20 | 9 | 116 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks....krngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklk 67
+fY +YA+++GFs+r ++k+ k++++i ++vC+keg+++++ + + ++ ++r+e+r+gCka +
Tp57577_TGAC_v2_mRNA37526 9 DFYGQYAYKTGFSTRSMLKSKNnsknKKSDKIHYLRYVCNKEGFKKKSLLNpnnkprsdspiviEFEKVKERPEERIGCKAGIY 92
6************997544444344499999****************99999999*******99999999************** PP
FAR1 68 vkkek.dgkwevtkleleHnHela 90
+k+++ +++++++ e H H+l
Tp57577_TGAC_v2_mRNA37526 93 LKLDEtLNVYKIYRWEGTHCHQLH 116
****9999**************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
FHSIKEVEDF YGQYAYKTGF STRSMLKSKN NSKNKKSDKI HYLRYVCNKE GFKKKSLLNP 60
NNKPRSDSPI VIEFEKVKER PEERIGCKAG IYLKLDETLN VYKIYRWEGT HCHQLHRKEH 120
HRYLRSFQEV NEVQGQLALI NSKAGMSMRT SYEAMGQGVG GTENLPFRFS DLKNYLMTIR 180
SKEMIRGETT VIQEFFRNEA MSKPSFYYDM
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