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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA35801 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 455aa MW: 50300.3 Da PI: 7.7911 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA35801 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.1 | 1.1e-09 | 167 | 209 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+ k rr+++NReAAr+sR+RKka++++Le +L++ ++L
Tp57577_TGAC_v2_mRNA35801 167 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 209
568899************************9777777666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009410 | Biological Process | response to xenobiotic stimulus |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 455 aa
Download sequence Send
to blast |
MGSRRRTAED TNKVVNGMPS YAPPLPPSNS MGMEGNIHPS RLSDFGAIEQ SLGFRIEDAM 60 NLSRNPVFNQ MKSNSQALGA DIQFGALNKA IANSDTNLSA AIGGSQTLQL QKESQPNLAS 120 TSGGHRENWG ESNMADGSAD TSTDDTEDKN QMPERGESSE RSKDKSDQKT LRRLAQNREA 180 ARKSRLRKKA YVQQLESSRL KLTQLEQELQ RARQQGIFIS STGEQTHSMS GNGAMAFDAE 240 YARWLEEHNR QTNELRAAIN SHAGDIELRT IVDNFMTQFE DIYRLKGVAA KADVFHILSG 300 MWKTPAERCF MWIGGFRSSE LLKLLVSHLE PLTEQQLMGI YNLQQSSQQA EDALSQGMDA 360 LQQSLSETLA NGSPNPSGAS GNVANYMGQM AMAMGKLGTL EGFLRQADNL RQQTLQQMLR 420 ILTTRQSARA LLAISDYFSR LRALSSLWLA RPRD*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT139514 | 0.0 | BT139514.1 Medicago truncatula clone JCVI-FLMt-18J5 unknown mRNA. |