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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Tp57577_TGAC_v2_mRNA35548 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
bZIP |
Protein Properties |
Length: 549aa MW: 60468.8 Da PI: 8.2759 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA35548 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.4 | 2.4e-11 | 382 | 440 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR++A rs +RK +i eLe kv++L++e ++L + +l+ ++lk+ +
Tp57577_TGAC_v2_mRNA35548 382 KRAKRILANRLSAARSKERKMRYISELEHKVQTLQTETTTLSTQFTKLQMDNSELKNAN 440
9***************************************************9999876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 549 aa
Download sequence Send
to blast |
MEGFDQSGNN QKNIHTFSSS LGASAKPPIR LNSMPINQIN QMGFPENHKS SGLGIPPSYP 60 NTNTSLSPKP SSPYPQFIGS QSQSHSRSSS QPTFFSLDSF SLPPLSPSVY PPVSSNPFSD 120 SGSKDISMEE NFGVSHAPSP SRGHAVQHGL CLPPRKGHRR SSSDSPLGIS EFVNSVPQLV 180 GDRRNLVSGG EKSGYEKPVQ LVLKGRDSVD GFRGEVFDGK KEDTMDDLFT AYMNLENMHN 240 MSFSGMEDSR TSGSKTVESS DNEAESHVNV KGIGAKGASS SGSDERREGV KRNSNGDIAP 300 GSRHRRSFSL DSSIGNFQFE DGSPKLPPLQ SQAGQHSPSN SMDGCKTPEI SMEFGNGEFS 360 SQEIKKIMEN DKLAEIAVSD PKRAKRILAN RLSAARSKER KMRYISELEH KVQTLQTETT 420 TLSTQFTKLQ MDNSELKNAN NEYKLRLQSM EQQSQLKDAL NETLDAEVRR LRRTVAELGG 480 ESLLSSLMAR QLALNQQMFQ SQHQQPTQLR NFQPQNSQSQ EETQTQSQQH IQRNHEFQSK 540 HQNGKTTA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC124216 | 0.0 | AC124216.27 Medicago truncatula clone mth2-34o22, complete sequence. |
GenBank | AC174315 | 0.0 | AC174315.4 Medicago truncatula clone mth2-165c4, complete sequence. |