PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Tp57577_TGAC_v2_mRNA35068

Organism

Trifolium pratense

Taxonomic ID

57577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium

Family

bZIP

Protein Properties

Length: 321aa MW: 36188.6 Da PI: 7.7686

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Tp57577_TGAC_v2_mRNA35068	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.2	2.4e-15	250	298	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r++r++kNRe+A rsR+R++a+++eLe kv Le+eN++L+k++e+ k Tp57577_TGAC_v2_mRNA35068 250 RRQKRMIKNRESAARSRARRQAYTQELELKVSCLEEENERLRKQNETEK 298 79****************************************9988654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.8E-15	244	296	No hit	No description
SMART	SM00338	4.8E-14	246	318	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.346	248	293	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-12	250	298	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.94E-11	250	296	No hit	No description
PROSITE pattern	PS00036	0	253	268	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MASQGGTVQE SRTTLLSRSG SLYNLTLDEV QNHLGNLGKP LGSMNLDELL KSVWSVEAGE 60 VFDFGNDVAG TTTQHNQLGE MNRQGSLTLS GDLRKKTVDE VWRDMQIEKK RSVDRDRKAP 120 DRQQTLGEMT LEDFLVKAGV VGESFHNKEG DLLRVDLNED SRQNVSQHGH HWMQFQLPSV 180 QQQQQQHQQE KHMMPGFVPV HAIQQPFQVA GQVLDAPISP SSLMGTLSDT QTLGRKRVAS 240 GIVVEKTVER RQKRMIKNRE SAARSRARRQ AYTQELELKV SCLEEENERL RKQNETEKEV 300 PCAPPPEPKN QLRRTNSASF *

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Tp57577_TGAC_v2_mRNA35068

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003618910.1	1e-173	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-101	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2K3MTC6	0.0	A0A2K3MTC6_TRIPR; Abscisic acid-insensitive 5-like protein
STRING	AES75128	1e-172	(Medicago truncatula)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-88	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Tp57577_TGAC_v2_mRNA35068

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]