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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Tp57577_TGAC_v2_mRNA35059 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family |
MYB |
Protein Properties |
Length: 263aa MW: 30228.4 Da PI: 10.1327 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Tp57577_TGAC_v2_mRNA35059 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 45.9 | 1.3e-14 | 31 | 74 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rWT Ed++l ++vk +G+++W+ Ia+++ gR++k+c++rw +
Tp57577_TGAC_v2_mRNA35059 31 RWTRSEDDKLNKLVKYFGPRNWNHIAEHFH-GRSEKSCRLRWINQ 74
9*****************************.***********985 PP
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2 | Myb_DNA-binding | 45.4 | 1.9e-14 | 81 | 125 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r ++++eE +l+ a + +G++ W+tI + ++ gRt +q+k+++++
Tp57577_TGAC_v2_mRNA35059 81 RSKFSKEEKAKLLAAQRFYGNN-WATICKLFP-GRTNNQVKNHFYMM 125
789*****************99.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MSSQNFNNND LSLXXXXXXX XXXXXXXXXX RWTRSEDDKL NKLVKYFGPR NWNHIAEHFH 60 GRSEKSCRLR WINQLDPKIN RSKFSKEEKA KLLAAQRFYG NNWATICKLF PGRTNNQVKN 120 HFYMMMAKMQ REXXFRTPPT MYRITSTTDV PNSACTNVSC FTGPLLYRQA YGSQMGLHGE 180 RKVEVGNFGY ETNFSAMKGS YVSRMGKING VDKSNYSYSN SEASVSEAGS TIRTNVSIFG 240 ECENVRSKTK LQYFDFLGIG DK*
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