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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA3443 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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| Family |
AP2 |
| Protein Properties |
Length: 330aa MW: 37529.1 Da PI: 7.3416 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA3443 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 40 | 9.8e-13 | 41 | 97 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa+a++ a++k++g
Tp57577_TGAC_v2_mRNA3443 41 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQSKKGRQGAYDDEEAAARAYDLAALKYWG 97
57*******************99998888888888********************98 PP
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| 2 | AP2 | 50.1 | 7e-16 | 140 | 191 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
Tp57577_TGAC_v2_mRNA3443 140 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDVAAIQYRG 191
89****99**********99966...3.6*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0040008 | Biological Process | regulation of growth |
| GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
| GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
| GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MAKKSQKSHK TTSSNSSSTT TTMVKRKRKS IQRTSPPQRS SIYRGVTRHR WTGRYEAHLW 60
DKNCWNESQS KKGRQGAYDD EEAAARAYDL AALKYWGQET ILNFQVSNYQ EELKEMEGQS 120
KEEYIGSLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNKYLYLG TYATQEEAAT 180
AYDVAAIQYR GLNAVTNFDL SRYSNWLGPK TQDNNDNNNH NNQNSSNNQE LDLNQELDVS 240
ATSASSAFGH ILKSSKFTEM IEKTLPDEIE DSYTPPSSES TPPRRTFPED IQTIFETQDS 300
SIYTENDDDI IFGELSSFAA PIFHYGLDV*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
