 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Tp57577_TGAC_v2_mRNA33916 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
|
| Family |
MYB_related |
| Protein Properties |
Length: 199aa MW: 22021.2 Da PI: 5.6054 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Tp57577_TGAC_v2_mRNA33916 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 22.5 | 2.6e-07 | 27 | 48 | 24 | 46 |
HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
W+ Ia++++ gRt++++k++w++
Tp57577_TGAC_v2_mRNA33916 27 WSIIASKLQ-GRTDNDVKNYWNT 48
9********.***********97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MWTVSDQYRT VHIQGSADLS LIKIKWWSII ASKLQGRTDN DVKNYWNTKL KKKFMFINHS 60
MEMKSQQVTL LSILQSSTST SQSLSFTSNK NNSYYHHSNG SFTSSFSNSS TSSSLLSGNS 120
STSAAQESFI GSSQKCGDAA FVEQNIGDVS YIYEVEDSEK LMFSNGGSVN GFWEENPLDY 180
GVISTTSTSS CNNFLFDE*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EF468479 | 3e-45 | EF468479.1 Medicago truncatula MYB transcription factor MYB37 mRNA, complete cds. |
